Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Mir1199-201ENSMUST00000117015 119 ntBASIC13.88□□□□□ -0.19
Slc6a1P31648 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Slc6a1P31648 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Slc6a1P31648 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Slc6a1P31648 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Slc6a1P31648 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a1P31648 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Slc6a1P31648 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Slc6a1P31648 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.87□□□□□ -0.19
Slc6a1P31648 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Slc6a1P31648 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.87□□□□□ -0.19
Slc6a1P31648 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Mir6349-201ENSMUST00000184059 97 ntBASIC13.87□□□□□ -0.19
Slc6a1P31648 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Slc6a1P31648 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Slc6a1P31648 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Slc6a1P31648 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.87□□□□□ -0.19
Slc6a1P31648 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a1P31648 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Slc6a1P31648 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Slc6a1P31648 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Slc6a1P31648 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.86□□□□□ -0.19
Slc6a1P31648 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Slc6a1P31648 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.86□□□□□ -0.19
Slc6a1P31648 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Gm10698-201ENSMUST00000182663 604 ntBASIC13.86□□□□□ -0.19
Slc6a1P31648 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.86□□□□□ -0.19
Slc6a1P31648 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.86□□□□□ -0.19
Slc6a1P31648 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.86□□□□□ -0.19
Slc6a1P31648 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Slc6a1P31648 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.86□□□□□ -0.19
Slc6a1P31648 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.86□□□□□ -0.19
Slc6a1P31648 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc6a1P31648 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Slc6a1P31648 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms