Protein–RNA interactions for Protein: P29452

Casp1, Caspase-1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp1P29452 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.29■□□□□ 0.68
Casp1P29452 Gm7222-201ENSMUST00000117512 906 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.29■□□□□ 0.68
Casp1P29452 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp1P29452 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm8825-201ENSMUST00000182565 998 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm4518-201ENSMUST00000182638 718 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp1P29452 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.29■□□□□ 0.68
Casp1P29452 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp1P29452 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Casp1P29452 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp1P29452 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casp1P29452 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp1P29452 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Casp1P29452 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp1P29452 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Casp1P29452 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp1P29452 Gm15467-201ENSMUST00000120582 445 ntBASIC19.28■□□□□ 0.68
Casp1P29452 Gm27646-201ENSMUST00000183989 110 ntBASIC19.28■□□□□ 0.68
Casp1P29452 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.28■□□□□ 0.68
Casp1P29452 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.28■□□□□ 0.68
Casp1P29452 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.28■□□□□ 0.68
Casp1P29452 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp1P29452 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Casp1P29452 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Casp1P29452 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp1P29452 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp1P29452 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.28■□□□□ 0.68
Casp1P29452 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casp1P29452 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Casp1P29452 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Casp1P29452 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Casp1P29452 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Casp1P29452 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.27■□□□□ 0.68
Casp1P29452 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Casp1P29452 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.27■□□□□ 0.68
Casp1P29452 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.27■□□□□ 0.68
Casp1P29452 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Casp1P29452 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.27■□□□□ 0.68
Casp1P29452 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.27■□□□□ 0.68
Casp1P29452 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casp1P29452 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Casp1P29452 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Casp1P29452 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Casp1P29452 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Gm14140-201ENSMUST00000119999 995 ntBASIC19.26■□□□□ 0.67
Casp1P29452 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.26■□□□□ 0.67
Casp1P29452 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.26■□□□□ 0.67
Casp1P29452 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.26■□□□□ 0.67
Casp1P29452 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.26■□□□□ 0.67
Casp1P29452 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Casp1P29452 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Casp1P29452 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.26■□□□□ 0.67
Casp1P29452 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Casp1P29452 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Casp1P29452 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casp1P29452 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casp1P29452 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casp1P29452 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casp1P29452 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms