Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Mmp3P28862 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Mmp3P28862 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.18■□□□□ 0.34
Mmp3P28862 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.18■□□□□ 0.34
Mmp3P28862 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Gm27646-201ENSMUST00000183989 110 ntBASIC17.18■□□□□ 0.34
Mmp3P28862 Gm27628-201ENSMUST00000184911 107 ntBASIC17.18■□□□□ 0.34
Mmp3P28862 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.18■□□□□ 0.34
Mmp3P28862 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Mmp3P28862 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Mmp3P28862 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.18■□□□□ 0.34
Mmp3P28862 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Mmp3P28862 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp3P28862 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Mmp3P28862 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.17■□□□□ 0.34
Mmp3P28862 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.17■□□□□ 0.34
Mmp3P28862 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Mmp3P28862 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.17■□□□□ 0.34
Mmp3P28862 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Mmp3P28862 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Mmp3P28862 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp3P28862 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp3P28862 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp3P28862 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp3P28862 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.16■□□□□ 0.34
Mmp3P28862 Gm11779-201ENSMUST00000118541 368 ntBASIC17.16■□□□□ 0.34
Mmp3P28862 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Mmp3P28862 Gm8000-201ENSMUST00000188378 592 ntBASIC17.16■□□□□ 0.34
Mmp3P28862 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.16■□□□□ 0.34
Mmp3P28862 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp3P28862 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp3P28862 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp3P28862 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp3P28862 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Mmp3P28862 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Mmp3P28862 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp3P28862 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp3P28862 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Mmp3P28862 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp3P28862 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Mmp3P28862 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Mmp3P28862 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.15■□□□□ 0.34
Mmp3P28862 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Mmp3P28862 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.15■□□□□ 0.34
Mmp3P28862 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Mmp3P28862 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.15■□□□□ 0.34
Mmp3P28862 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.15■□□□□ 0.34
Mmp3P28862 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.15■□□□□ 0.34
Mmp3P28862 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Gm5867-201ENSMUST00000063197 592 ntBASIC17.15■□□□□ 0.34
Mmp3P28862 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Mmp3P28862 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp3P28862 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mmp3P28862 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp3P28862 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp3P28862 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Mmp3P28862 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp3P28862 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Mmp3P28862 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp3P28862 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms