Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.98□□□□□ -0.01
Clk1P22518 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.98□□□□□ -0.01
Clk1P22518 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Gm13836-201ENSMUST00000121159 501 ntBASIC14.98□□□□□ -0.01
Clk1P22518 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Gm18421-201ENSMUST00000204122 625 ntBASIC14.98□□□□□ -0.01
Clk1P22518 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.98□□□□□ -0.01
Clk1P22518 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.98□□□□□ -0.01
Clk1P22518 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Clk1P22518 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Clk1P22518 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clk1P22518 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Clk1P22518 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.97□□□□□ -0.01
Clk1P22518 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Clk1P22518 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.97□□□□□ -0.01
Clk1P22518 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.97□□□□□ -0.01
Clk1P22518 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.97□□□□□ -0.01
Clk1P22518 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.97□□□□□ -0.01
Clk1P22518 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.97□□□□□ -0.01
Clk1P22518 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.97□□□□□ -0.01
Clk1P22518 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Clk1P22518 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clk1P22518 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk1P22518 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.96□□□□□ -0.01
Clk1P22518 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.96□□□□□ -0.01
Clk1P22518 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk1P22518 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk1P22518 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk1P22518 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk1P22518 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Clk1P22518 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Clk1P22518 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.96□□□□□ -0.01
Clk1P22518 Mir7071-201ENSMUST00000184847 69 ntBASIC14.96□□□□□ -0.01
Clk1P22518 Gm37722-201ENSMUST00000193757 208 ntBASIC14.96□□□□□ -0.01
Clk1P22518 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.96□□□□□ -0.01
Clk1P22518 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Clk1P22518 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk1P22518 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Clk1P22518 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.96□□□□□ -0.01
Clk1P22518 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk1P22518 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clk1P22518 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Clk1P22518 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Clk1P22518 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clk1P22518 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Clk1P22518 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clk1P22518 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clk1P22518 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.95□□□□□ -0.02
Clk1P22518 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.95□□□□□ -0.02
Clk1P22518 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Clk1P22518 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Clk1P22518 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Gm25016-201ENSMUST00000158399 131 ntBASIC14.95□□□□□ -0.02
Clk1P22518 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.95□□□□□ -0.02
Clk1P22518 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.95□□□□□ -0.02
Clk1P22518 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.95□□□□□ -0.02
Clk1P22518 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.95□□□□□ -0.02
Clk1P22518 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Clk1P22518 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clk1P22518 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms