Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
P20040 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
P20040 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.32□□□□□ -0.12
P20040 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.32□□□□□ -0.12
P20040 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.32□□□□□ -0.12
P20040 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.32□□□□□ -0.12
P20040 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.32□□□□□ -0.12
P20040 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
P20040 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P20040 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.31□□□□□ -0.12
P20040 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
P20040 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
P20040 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
P20040 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.31□□□□□ -0.12
P20040 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
P20040 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P20040 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.31□□□□□ -0.12
P20040 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
P20040 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
P20040 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.31□□□□□ -0.12
P20040 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P20040 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P20040 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P20040 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.3□□□□□ -0.12
P20040 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.3□□□□□ -0.12
P20040 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
P20040 Gm21559-201ENSMUST00000220638 855 ntBASIC14.3□□□□□ -0.12
P20040 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
P20040 Gm8587-201ENSMUST00000076538 843 ntBASIC14.3□□□□□ -0.12
P20040 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.3□□□□□ -0.12
P20040 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
P20040 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.3□□□□□ -0.12
P20040 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
P20040 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
P20040 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P20040 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.29□□□□□ -0.12
P20040 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
P20040 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
P20040 Gm23634-201ENSMUST00000175071 91 ntBASIC14.29□□□□□ -0.12
P20040 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.29□□□□□ -0.12
P20040 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms