Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Cd44P15379 Gm26039-201ENSMUST00000158152 144 ntBASIC16.92■□□□□ 0.3
Cd44P15379 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
Cd44P15379 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cd44P15379 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd44P15379 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cd44P15379 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cd44P15379 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Cd44P15379 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.91■□□□□ 0.3
Cd44P15379 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.91■□□□□ 0.3
Cd44P15379 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.91■□□□□ 0.3
Cd44P15379 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cd44P15379 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cd44P15379 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cd44P15379 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cd44P15379 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd44P15379 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Cd44P15379 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cd44P15379 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.9■□□□□ 0.3
Cd44P15379 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cd44P15379 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cd44P15379 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd44P15379 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Cd44P15379 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Cd44P15379 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cd44P15379 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Cd44P15379 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd44P15379 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd44P15379 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.89■□□□□ 0.29
Cd44P15379 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd44P15379 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd44P15379 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd44P15379 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cd44P15379 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cd44P15379 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd44P15379 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd44P15379 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd44P15379 Mir1668-201ENSMUST00000184114 107 ntBASIC16.89■□□□□ 0.29
Cd44P15379 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd44P15379 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd44P15379 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd44P15379 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd44P15379 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Cd44P15379 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.88■□□□□ 0.29
Cd44P15379 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.88■□□□□ 0.29
Cd44P15379 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.88■□□□□ 0.29
Cd44P15379 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Cd44P15379 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.88■□□□□ 0.29
Cd44P15379 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cd44P15379 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cd44P15379 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.88■□□□□ 0.29
Cd44P15379 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd44P15379 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd44P15379 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms