Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Gm16215-201ENSMUST00000161990 637 ntBASIC12.32□□□□□ -0.44
Fn1P11276 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.32□□□□□ -0.44
Fn1P11276 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Fn1P11276 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Fn1P11276 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.32□□□□□ -0.44
Fn1P11276 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.32□□□□□ -0.44
Fn1P11276 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.32□□□□□ -0.44
Fn1P11276 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.32□□□□□ -0.44
Fn1P11276 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.32□□□□□ -0.44
Fn1P11276 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.32□□□□□ -0.44
Fn1P11276 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.32□□□□□ -0.44
Fn1P11276 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.32□□□□□ -0.44
Fn1P11276 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.32□□□□□ -0.44
Fn1P11276 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.32□□□□□ -0.44
Fn1P11276 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.32□□□□□ -0.44
Fn1P11276 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Gm6180-201ENSMUST00000065243 498 ntBASIC12.32□□□□□ -0.44
Fn1P11276 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.32□□□□□ -0.44
Fn1P11276 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fn1P11276 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Fn1P11276 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Fn1P11276 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Fn1P11276 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.31□□□□□ -0.44
Fn1P11276 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Fn1P11276 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.31□□□□□ -0.44
Fn1P11276 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Fn1P11276 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.31□□□□□ -0.44
Fn1P11276 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm4518-201ENSMUST00000182638 718 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Fn1P11276 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.31□□□□□ -0.44
Fn1P11276 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Fn1P11276 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Fn1P11276 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Fn1P11276 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Fn1P11276 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.3□□□□□ -0.44
Fn1P11276 Gm28631-201ENSMUST00000190740 334 ntBASIC12.3□□□□□ -0.44
Fn1P11276 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Dapk1-207ENSMUST00000226059 5009 ntBASIC12.3□□□□□ -0.44
Fn1P11276 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Fn1P11276 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.3□□□□□ -0.44
Fn1P11276 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.3□□□□□ -0.44
Fn1P11276 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.3□□□□□ -0.44
Fn1P11276 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Fn1P11276 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fn1P11276 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fn1P11276 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms