Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.13□□□□□ -0.63
Smim1P0C8K7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smim1P0C8K7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
Smim1P0C8K7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Reep4-203ENSMUST00000226563 1444 ntBASIC11.12□□□□□ -0.63
Smim1P0C8K7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Mir7075-201ENSMUST00000184187 82 ntBASIC11.12□□□□□ -0.63
Smim1P0C8K7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smim1P0C8K7 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.12□□□□□ -0.63
Smim1P0C8K7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Cap2-205ENSMUST00000225824 1634 ntBASIC11.11□□□□□ -0.63
Smim1P0C8K7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.11□□□□□ -0.63
Smim1P0C8K7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.11□□□□□ -0.63
Smim1P0C8K7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smim1P0C8K7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Smim1P0C8K7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Gm2399-201ENSMUST00000104944 225 ntBASIC11.1□□□□□ -0.63
Smim1P0C8K7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms