Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.79■□□□□ 0.92
Hoxc9P09633 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Hoxc9P09633 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.79■□□□□ 0.92
Hoxc9P09633 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 Gm13597-201ENSMUST00000121239 375 ntBASIC20.79■□□□□ 0.92
Hoxc9P09633 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hoxc9P09633 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hoxc9P09633 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.79■□□□□ 0.92
Hoxc9P09633 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc9P09633 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc9P09633 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc9P09633 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc9P09633 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc9P09633 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc9P09633 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hoxc9P09633 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.78■□□□□ 0.92
Hoxc9P09633 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.78■□□□□ 0.92
Hoxc9P09633 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Hoxc9P09633 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc9P09633 Gm9682-201ENSMUST00000197505 556 ntBASIC20.78■□□□□ 0.92
Hoxc9P09633 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.78■□□□□ 0.92
Hoxc9P09633 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc9P09633 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Hoxc9P09633 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.78■□□□□ 0.92
Hoxc9P09633 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc9P09633 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc9P09633 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.77■□□□□ 0.92
Hoxc9P09633 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc9P09633 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc9P09633 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc9P09633 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc9P09633 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.77■□□□□ 0.92
Hoxc9P09633 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc9P09633 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc9P09633 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Hoxc9P09633 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc9P09633 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hoxc9P09633 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Hoxc9P09633 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hoxc9P09633 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc9P09633 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.76■□□□□ 0.91
Hoxc9P09633 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc9P09633 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc9P09633 Gm13216-201ENSMUST00000117145 591 ntBASIC20.76■□□□□ 0.91
Hoxc9P09633 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.76■□□□□ 0.91
Hoxc9P09633 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc9P09633 Gm17968-201ENSMUST00000194902 784 ntBASIC20.76■□□□□ 0.91
Hoxc9P09633 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Hoxc9P09633 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc9P09633 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc9P09633 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc9P09633 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Hoxc9P09633 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc9P09633 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc9P09633 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Hoxc9P09633 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Hoxc9P09633 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxc9P09633 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hoxc9P09633 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.75■□□□□ 0.91
Hoxc9P09633 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.75■□□□□ 0.91
Hoxc9P09633 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.75■□□□□ 0.91
Hoxc9P09633 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxc9P09633 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxc9P09633 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxc9P09633 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hoxc9P09633 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxc9P09633 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxc9P09633 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hoxc9P09633 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Hoxc9P09633 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.74■□□□□ 0.91
Hoxc9P09633 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Gm18489-201ENSMUST00000172565 551 ntBASIC20.74■□□□□ 0.91
Hoxc9P09633 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Gm19164-201ENSMUST00000210667 640 ntBASIC20.74■□□□□ 0.91
Hoxc9P09633 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hoxc9P09633 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxc9P09633 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms