Protein–RNA interactions for Protein: P01904

H2-Ea, H-2 class II histocompatibility antigen, E-D alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-EaP01904 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
H2-EaP01904 Gm12382-201ENSMUST00000122005 922 ntBASIC14.16□□□□□ -0.14
H2-EaP01904 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.16□□□□□ -0.14
H2-EaP01904 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.16□□□□□ -0.14
H2-EaP01904 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.16□□□□□ -0.14
H2-EaP01904 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
H2-EaP01904 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2-EaP01904 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2-EaP01904 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
H2-EaP01904 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H2-EaP01904 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H2-EaP01904 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.15□□□□□ -0.14
H2-EaP01904 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2-EaP01904 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2-EaP01904 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H2-EaP01904 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H2-EaP01904 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.15□□□□□ -0.14
H2-EaP01904 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2-EaP01904 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.15
H2-EaP01904 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
H2-EaP01904 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
H2-EaP01904 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.14□□□□□ -0.15
H2-EaP01904 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
H2-EaP01904 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.14□□□□□ -0.15
H2-EaP01904 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Gm27275-201ENSMUST00000184318 272 ntBASIC14.14□□□□□ -0.15
H2-EaP01904 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.14□□□□□ -0.15
H2-EaP01904 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.14□□□□□ -0.15
H2-EaP01904 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
H2-EaP01904 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2-EaP01904 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.13□□□□□ -0.15
H2-EaP01904 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.13□□□□□ -0.15
H2-EaP01904 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
H2-EaP01904 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
H2-EaP01904 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
H2-EaP01904 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
H2-EaP01904 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2-EaP01904 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms