Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TcraP01849 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TcraP01849 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TcraP01849 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.8□□□□□ -0.52
TcraP01849 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TcraP01849 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.79□□□□□ -0.52
TcraP01849 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
TcraP01849 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.79□□□□□ -0.52
TcraP01849 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TcraP01849 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.79□□□□□ -0.52
TcraP01849 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.79□□□□□ -0.52
TcraP01849 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TcraP01849 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.79□□□□□ -0.52
TcraP01849 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TcraP01849 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TcraP01849 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.79□□□□□ -0.52
TcraP01849 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TcraP01849 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TcraP01849 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
TcraP01849 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TcraP01849 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
TcraP01849 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
TcraP01849 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.78□□□□□ -0.52
TcraP01849 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.78□□□□□ -0.52
TcraP01849 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.78□□□□□ -0.52
TcraP01849 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.78□□□□□ -0.52
TcraP01849 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.78□□□□□ -0.52
TcraP01849 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TcraP01849 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Asic1-205ENSMUST00000228185 1818 ntBASIC11.78□□□□□ -0.52
TcraP01849 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TcraP01849 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TcraP01849 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TcraP01849 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
TcraP01849 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
TcraP01849 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TcraP01849 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
TcraP01849 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TcraP01849 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TcraP01849 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TcraP01849 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms