Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Syn1O88935 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Syn1O88935 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.51■□□□□ 0.23
Syn1O88935 Gm23547-201ENSMUST00000158210 271 ntBASIC16.51■□□□□ 0.23
Syn1O88935 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.51■□□□□ 0.23
Syn1O88935 Gm27646-201ENSMUST00000183989 110 ntBASIC16.51■□□□□ 0.23
Syn1O88935 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.51■□□□□ 0.23
Syn1O88935 Gm44335-201ENSMUST00000196879 141 ntBASIC16.51■□□□□ 0.23
Syn1O88935 Gm44297-201ENSMUST00000198304 141 ntBASIC16.51■□□□□ 0.23
Syn1O88935 Gm44346-201ENSMUST00000198851 141 ntBASIC16.51■□□□□ 0.23
Syn1O88935 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.51■□□□□ 0.23
Syn1O88935 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.51■□□□□ 0.23
Syn1O88935 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Syn1O88935 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Syn1O88935 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syn1O88935 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Syn1O88935 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.5■□□□□ 0.23
Syn1O88935 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Syn1O88935 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.5■□□□□ 0.23
Syn1O88935 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Syn1O88935 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.5■□□□□ 0.23
Syn1O88935 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.5■□□□□ 0.23
Syn1O88935 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Syn1O88935 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.5■□□□□ 0.23
Syn1O88935 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.5■□□□□ 0.23
Syn1O88935 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syn1O88935 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.49■□□□□ 0.23
Syn1O88935 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Syn1O88935 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.49■□□□□ 0.23
Syn1O88935 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.49■□□□□ 0.23
Syn1O88935 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.49■□□□□ 0.23
Syn1O88935 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.49■□□□□ 0.23
Syn1O88935 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.49■□□□□ 0.23
Syn1O88935 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Syn1O88935 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.49■□□□□ 0.23
Syn1O88935 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Syn1O88935 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.48■□□□□ 0.23
Syn1O88935 Gm12428-201ENSMUST00000119844 727 ntBASIC16.48■□□□□ 0.23
Syn1O88935 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.48■□□□□ 0.23
Syn1O88935 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms