Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hdac3O88895 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.41□□□□□ -0.1
Hdac3O88895 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.41□□□□□ -0.1
Hdac3O88895 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hdac3O88895 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.41□□□□□ -0.1
Hdac3O88895 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.41□□□□□ -0.1
Hdac3O88895 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hdac3O88895 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.41□□□□□ -0.1
Hdac3O88895 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Hdac3O88895 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Hdac3O88895 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdac3O88895 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.4□□□□□ -0.1
Hdac3O88895 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.4□□□□□ -0.1
Hdac3O88895 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.4□□□□□ -0.1
Hdac3O88895 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Gm27389-201ENSMUST00000183622 195 ntBASIC14.4□□□□□ -0.1
Hdac3O88895 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hdac3O88895 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.4□□□□□ -0.1
Hdac3O88895 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hdac3O88895 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.4□□□□□ -0.1
Hdac3O88895 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hdac3O88895 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdac3O88895 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hdac3O88895 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hdac3O88895 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.39□□□□□ -0.11
Hdac3O88895 Gm26039-201ENSMUST00000158152 144 ntBASIC14.39□□□□□ -0.11
Hdac3O88895 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.39□□□□□ -0.11
Hdac3O88895 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.39□□□□□ -0.11
Hdac3O88895 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Hdac3O88895 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.39□□□□□ -0.11
Hdac3O88895 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Hdac3O88895 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hdac3O88895 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hdac3O88895 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Hdac3O88895 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hdac3O88895 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.38□□□□□ -0.11
Hdac3O88895 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hdac3O88895 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hdac3O88895 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms