Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CcnkO88874 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.35□□□□□ -0.11
CcnkO88874 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.35□□□□□ -0.11
CcnkO88874 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.35□□□□□ -0.11
CcnkO88874 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.34□□□□□ -0.11
CcnkO88874 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CcnkO88874 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
CcnkO88874 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.34□□□□□ -0.11
CcnkO88874 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.34□□□□□ -0.11
CcnkO88874 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CcnkO88874 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CcnkO88874 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CcnkO88874 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.33□□□□□ -0.11
CcnkO88874 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CcnkO88874 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.33□□□□□ -0.11
CcnkO88874 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CcnkO88874 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CcnkO88874 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CcnkO88874 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
CcnkO88874 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CcnkO88874 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CcnkO88874 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CcnkO88874 Gm3375-201ENSMUST00000203929 796 ntBASIC14.33□□□□□ -0.12
CcnkO88874 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.33□□□□□ -0.12
CcnkO88874 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CcnkO88874 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CcnkO88874 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.32□□□□□ -0.12
CcnkO88874 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.32□□□□□ -0.12
CcnkO88874 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.32□□□□□ -0.12
CcnkO88874 Mir5122-201ENSMUST00000175004 89 ntBASIC14.32□□□□□ -0.12
CcnkO88874 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CcnkO88874 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.32□□□□□ -0.12
CcnkO88874 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CcnkO88874 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
CcnkO88874 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.32□□□□□ -0.12
CcnkO88874 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.32□□□□□ -0.12
CcnkO88874 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CcnkO88874 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms