Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.56□□□□□ -0.08
Lmx1bO88609 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Gm15165-201ENSMUST00000118140 502 ntBASIC14.56□□□□□ -0.08
Lmx1bO88609 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Lmx1bO88609 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lmx1bO88609 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lmx1bO88609 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.56□□□□□ -0.08
Lmx1bO88609 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Lmx1bO88609 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.55□□□□□ -0.08
Lmx1bO88609 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Lmx1bO88609 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.55□□□□□ -0.08
Lmx1bO88609 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.55□□□□□ -0.08
Lmx1bO88609 Gm44454-201ENSMUST00000198541 138 ntBASIC14.55□□□□□ -0.08
Lmx1bO88609 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.55□□□□□ -0.08
Lmx1bO88609 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.55□□□□□ -0.08
Lmx1bO88609 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Lmx1bO88609 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Lmx1bO88609 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lmx1bO88609 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Lmx1bO88609 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Lmx1bO88609 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Dancr-204ENSMUST00000132389 2347 ntBASIC14.54□□□□□ -0.08
Lmx1bO88609 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.54□□□□□ -0.08
Lmx1bO88609 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Lmx1bO88609 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.54□□□□□ -0.08
Lmx1bO88609 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.54□□□□□ -0.08
Lmx1bO88609 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lmx1bO88609 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lmx1bO88609 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lmx1bO88609 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lmx1bO88609 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lmx1bO88609 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lmx1bO88609 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Lmx1bO88609 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Lmx1bO88609 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.53□□□□□ -0.08
Lmx1bO88609 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lmx1bO88609 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Lmx1bO88609 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms