Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cops3O88543 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.44□□□□□ -0.1
Cops3O88543 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cops3O88543 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cops3O88543 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.44□□□□□ -0.1
Cops3O88543 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Cops3O88543 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cops3O88543 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cops3O88543 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cops3O88543 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.43□□□□□ -0.1
Cops3O88543 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Cops3O88543 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cops3O88543 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.43□□□□□ -0.1
Cops3O88543 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.43□□□□□ -0.1
Cops3O88543 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.43□□□□□ -0.1
Cops3O88543 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cops3O88543 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.43□□□□□ -0.1
Cops3O88543 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.43□□□□□ -0.1
Cops3O88543 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cops3O88543 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.42□□□□□ -0.1
Cops3O88543 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cops3O88543 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cops3O88543 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.42□□□□□ -0.1
Cops3O88543 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cops3O88543 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cops3O88543 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cops3O88543 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cops3O88543 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Cops3O88543 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cops3O88543 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.41□□□□□ -0.1
Cops3O88543 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cops3O88543 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops3O88543 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.41□□□□□ -0.1
Cops3O88543 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.41□□□□□ -0.1
Cops3O88543 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cops3O88543 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops3O88543 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops3O88543 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Cops3O88543 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops3O88543 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.4□□□□□ -0.1
Cops3O88543 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cops3O88543 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cops3O88543 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.4□□□□□ -0.1
Cops3O88543 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops3O88543 Gm18421-201ENSMUST00000204122 625 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms