Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Mir7684-201ENSMUST00000183858 60 ntBASIC15.62■□□□□ 0.09
Cacna1hO88427 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.62■□□□□ 0.09
Cacna1hO88427 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cacna1hO88427 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cacna1hO88427 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.61■□□□□ 0.09
Cacna1hO88427 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1hO88427 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1hO88427 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Rpph1-201ENSMUST00000175096 319 ntBASIC15.61■□□□□ 0.09
Cacna1hO88427 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1hO88427 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1hO88427 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1hO88427 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1hO88427 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1hO88427 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1hO88427 Gm14928-201ENSMUST00000120198 477 ntBASIC15.61■□□□□ 0.09
Cacna1hO88427 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cacna1hO88427 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.61■□□□□ 0.09
Cacna1hO88427 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.6■□□□□ 0.09
Cacna1hO88427 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cacna1hO88427 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cacna1hO88427 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.6■□□□□ 0.09
Cacna1hO88427 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cacna1hO88427 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.6■□□□□ 0.09
Cacna1hO88427 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.6■□□□□ 0.09
Cacna1hO88427 Gm18489-201ENSMUST00000172565 551 ntBASIC15.6■□□□□ 0.09
Cacna1hO88427 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.6■□□□□ 0.09
Cacna1hO88427 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cacna1hO88427 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.59■□□□□ 0.09
Cacna1hO88427 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cacna1hO88427 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cacna1hO88427 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.59■□□□□ 0.09
Cacna1hO88427 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cacna1hO88427 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cacna1hO88427 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Cacna1hO88427 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cacna1hO88427 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Cacna1hO88427 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cacna1hO88427 Gm9682-201ENSMUST00000197505 556 ntBASIC15.58■□□□□ 0.09
Cacna1hO88427 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cacna1hO88427 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Cacna1hO88427 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cacna1hO88427 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cacna1hO88427 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cacna1hO88427 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cacna1hO88427 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.58■□□□□ 0.08
Cacna1hO88427 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cacna1hO88427 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cacna1hO88427 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.58■□□□□ 0.08
Cacna1hO88427 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cacna1hO88427 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Cacna1hO88427 Gm15487-201ENSMUST00000122373 465 ntBASIC15.58■□□□□ 0.08
Cacna1hO88427 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cacna1hO88427 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cacna1hO88427 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.58■□□□□ 0.08
Cacna1hO88427 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cacna1hO88427 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cacna1hO88427 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cacna1hO88427 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cacna1hO88427 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.57■□□□□ 0.08
Cacna1hO88427 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cacna1hO88427 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cacna1hO88427 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.57■□□□□ 0.08
Cacna1hO88427 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cacna1hO88427 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms