Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.73■□□□□ 0.91
Ubr1O70481 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.73■□□□□ 0.91
Ubr1O70481 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr1O70481 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.73■□□□□ 0.91
Ubr1O70481 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.73■□□□□ 0.91
Ubr1O70481 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr1O70481 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr1O70481 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr1O70481 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ubr1O70481 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr1O70481 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr1O70481 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr1O70481 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr1O70481 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr1O70481 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr1O70481 Gm14701-201ENSMUST00000117156 348 ntBASIC20.72■□□□□ 0.91
Ubr1O70481 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.72■□□□□ 0.91
Ubr1O70481 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.72■□□□□ 0.91
Ubr1O70481 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ubr1O70481 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr1O70481 Haglr-201ENSMUST00000100000 2085 ntBASIC20.72■□□□□ 0.91
Ubr1O70481 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr1O70481 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr1O70481 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr1O70481 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr1O70481 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr1O70481 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.72■□□□□ 0.91
Ubr1O70481 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.72■□□□□ 0.91
Ubr1O70481 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.72■□□□□ 0.91
Ubr1O70481 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ubr1O70481 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr1O70481 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ubr1O70481 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC20.71■□□□□ 0.91
Ubr1O70481 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.71■□□□□ 0.91
Ubr1O70481 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ubr1O70481 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.71■□□□□ 0.91
Ubr1O70481 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.71■□□□□ 0.91
Ubr1O70481 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubr1O70481 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ubr1O70481 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr1O70481 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr1O70481 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ubr1O70481 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr1O70481 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr1O70481 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr1O70481 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr1O70481 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr1O70481 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ubr1O70481 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.7■□□□□ 0.9
Ubr1O70481 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ubr1O70481 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC20.69■□□□□ 0.9
Ubr1O70481 Gm44335-201ENSMUST00000196879 141 ntBASIC20.69■□□□□ 0.9
Ubr1O70481 Gm44297-201ENSMUST00000198304 141 ntBASIC20.69■□□□□ 0.9
Ubr1O70481 Gm44346-201ENSMUST00000198851 141 ntBASIC20.69■□□□□ 0.9
Ubr1O70481 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.69■□□□□ 0.9
Ubr1O70481 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC20.69■□□□□ 0.9
Ubr1O70481 Thap2-203ENSMUST00000218989 527 ntBASIC20.69■□□□□ 0.9
Ubr1O70481 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.69■□□□□ 0.9
Ubr1O70481 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Ubr1O70481 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC20.69■□□□□ 0.9
Ubr1O70481 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Gm27301-201ENSMUST00000184012 127 ntBASIC20.69■□□□□ 0.9
Ubr1O70481 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ubr1O70481 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr1O70481 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr1O70481 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr1O70481 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.68■□□□□ 0.9
Ubr1O70481 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr1O70481 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ubr1O70481 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.68■□□□□ 0.9
Ubr1O70481 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Ubr1O70481 Gm10576-201ENSMUST00000191927 825 ntBASIC20.68■□□□□ 0.9
Ubr1O70481 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ubr1O70481 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ubr1O70481 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms