Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rpl35aO55142 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rpl35aO55142 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl35aO55142 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Rpl35aO55142 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.98□□□□□ -0.49
Rpl35aO55142 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rpl35aO55142 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.98□□□□□ -0.49
Rpl35aO55142 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rpl35aO55142 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.98□□□□□ -0.49
Rpl35aO55142 Gm18669-201ENSMUST00000216049 778 ntBASIC11.98□□□□□ -0.49
Rpl35aO55142 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.98□□□□□ -0.49
Rpl35aO55142 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rpl35aO55142 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl35aO55142 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.97□□□□□ -0.49
Rpl35aO55142 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rpl35aO55142 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Rpl35aO55142 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Rpl35aO55142 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.96□□□□□ -0.49
Rpl35aO55142 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Rpl35aO55142 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Rpl35aO55142 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rpl35aO55142 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rpl35aO55142 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Rpl35aO55142 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rpl35aO55142 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rpl35aO55142 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rpl35aO55142 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rpl35aO55142 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rpl35aO55142 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms