Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Kcnu1O54982 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Kcnu1O54982 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Kcnu1O54982 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Kcnu1O54982 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Kcnu1O54982 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Kcnu1O54982 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.16■□□□□ 0.34
Kcnu1O54982 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Kcnu1O54982 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Kcnu1O54982 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.16■□□□□ 0.34
Kcnu1O54982 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Kcnu1O54982 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Kcnu1O54982 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Kcnu1O54982 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Gm10052-201ENSMUST00000168019 960 ntBASIC17.15■□□□□ 0.34
Kcnu1O54982 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.15■□□□□ 0.34
Kcnu1O54982 Gm44430-201ENSMUST00000203376 995 ntBASIC17.15■□□□□ 0.34
Kcnu1O54982 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Gm7729-201ENSMUST00000050143 801 ntBASIC17.15■□□□□ 0.34
Kcnu1O54982 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Kcnu1O54982 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Kcnu1O54982 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Kcnu1O54982 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Kcnu1O54982 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Kcnu1O54982 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.14■□□□□ 0.33
Kcnu1O54982 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Kcnu1O54982 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.14■□□□□ 0.33
Kcnu1O54982 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Kcnu1O54982 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Kcnu1O54982 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Kcnu1O54982 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.13■□□□□ 0.33
Kcnu1O54982 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.13■□□□□ 0.33
Kcnu1O54982 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.13■□□□□ 0.33
Kcnu1O54982 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.13■□□□□ 0.33
Kcnu1O54982 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Kcnu1O54982 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.13■□□□□ 0.33
Kcnu1O54982 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Kcnu1O54982 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.13■□□□□ 0.33
Kcnu1O54982 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.13■□□□□ 0.33
Kcnu1O54982 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Kcnu1O54982 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Kcnu1O54982 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Kcnu1O54982 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Kcnu1O54982 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Kcnu1O54982 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.12■□□□□ 0.33
Kcnu1O54982 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.12■□□□□ 0.33
Kcnu1O54982 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Kcnu1O54982 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms