Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.8■□□□□ 0.28
Per2O54943 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Per2O54943 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.79■□□□□ 0.28
Per2O54943 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.79■□□□□ 0.28
Per2O54943 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Mir770-201ENSMUST00000103252 94 ntBASIC16.79■□□□□ 0.28
Per2O54943 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Per2O54943 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.79■□□□□ 0.28
Per2O54943 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
Per2O54943 Gm44430-201ENSMUST00000203376 995 ntBASIC16.79■□□□□ 0.28
Per2O54943 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Per2O54943 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Per2O54943 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Per2O54943 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Per2O54943 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.78■□□□□ 0.28
Per2O54943 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Per2O54943 Mir7071-201ENSMUST00000184847 69 ntBASIC16.78■□□□□ 0.28
Per2O54943 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.78■□□□□ 0.28
Per2O54943 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Per2O54943 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Per2O54943 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Dancr-204ENSMUST00000132389 2347 ntBASIC16.78■□□□□ 0.28
Per2O54943 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Per2O54943 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.77■□□□□ 0.28
Per2O54943 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per2O54943 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.77■□□□□ 0.28
Per2O54943 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Per2O54943 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Per2O54943 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per2O54943 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per2O54943 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Per2O54943 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Per2O54943 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per2O54943 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per2O54943 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Per2O54943 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per2O54943 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Per2O54943 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per2O54943 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Per2O54943 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Per2O54943 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per2O54943 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per2O54943 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Per2O54943 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per2O54943 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per2O54943 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per2O54943 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per2O54943 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Per2O54943 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.76■□□□□ 0.27
Per2O54943 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.76■□□□□ 0.27
Per2O54943 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Gm6623-201ENSMUST00000173570 544 ntBASIC16.76■□□□□ 0.27
Per2O54943 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms