Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn5O54942 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn5O54942 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn5O54942 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn5O54942 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn5O54942 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn5O54942 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Cldn5O54942 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.67■□□□□ 0.26
Cldn5O54942 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn5O54942 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cldn5O54942 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.66■□□□□ 0.26
Cldn5O54942 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Cldn5O54942 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cldn5O54942 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.66■□□□□ 0.26
Cldn5O54942 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.66■□□□□ 0.26
Cldn5O54942 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.66■□□□□ 0.26
Cldn5O54942 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.66■□□□□ 0.26
Cldn5O54942 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cldn5O54942 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn5O54942 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.65■□□□□ 0.26
Cldn5O54942 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cldn5O54942 Gm7862-201ENSMUST00000121461 292 ntBASIC16.65■□□□□ 0.26
Cldn5O54942 Gm12497-201ENSMUST00000138778 237 ntBASIC16.65■□□□□ 0.26
Cldn5O54942 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.65■□□□□ 0.26
Cldn5O54942 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.65■□□□□ 0.26
Cldn5O54942 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn5O54942 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.64■□□□□ 0.26
Cldn5O54942 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cldn5O54942 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cldn5O54942 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cldn5O54942 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cldn5O54942 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cldn5O54942 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.64■□□□□ 0.25
Cldn5O54942 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Cldn5O54942 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.64■□□□□ 0.25
Cldn5O54942 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.64■□□□□ 0.25
Cldn5O54942 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Cldn5O54942 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Cldn5O54942 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.64■□□□□ 0.25
Cldn5O54942 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cldn5O54942 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn5O54942 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Cldn5O54942 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn5O54942 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn5O54942 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn5O54942 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cldn5O54942 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn5O54942 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn5O54942 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cldn5O54942 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn5O54942 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn5O54942 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn5O54942 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.63■□□□□ 0.25
Cldn5O54942 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Cldn5O54942 Gm8097-201ENSMUST00000117903 829 ntBASIC16.63■□□□□ 0.25
Cldn5O54942 Gm13418-201ENSMUST00000119097 944 ntBASIC16.63■□□□□ 0.25
Cldn5O54942 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.63■□□□□ 0.25
Cldn5O54942 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms