Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn3O35701 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn3O35701 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn3O35701 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn3O35701 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn3O35701 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Matn3O35701 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Matn3O35701 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn3O35701 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn3O35701 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.69□□□□□ -0.06
Matn3O35701 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Matn3O35701 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Matn3O35701 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.68□□□□□ -0.06
Matn3O35701 BC037039-201ENSMUST00000192003 2205 ntBASIC14.68□□□□□ -0.06
Matn3O35701 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.68□□□□□ -0.06
Matn3O35701 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Gm17661-201ENSMUST00000170317 270 ntBASIC14.68□□□□□ -0.06
Matn3O35701 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Matn3O35701 Gm10812-201ENSMUST00000099864 546 ntBASIC14.68□□□□□ -0.06
Matn3O35701 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.68□□□□□ -0.06
Matn3O35701 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.68□□□□□ -0.06
Matn3O35701 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn3O35701 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Gm24841-201ENSMUST00000158676 357 ntBASIC14.67□□□□□ -0.06
Matn3O35701 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.67□□□□□ -0.06
Matn3O35701 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Matn3O35701 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Matn3O35701 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Matn3O35701 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.66□□□□□ -0.06
Matn3O35701 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Matn3O35701 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.66□□□□□ -0.06
Matn3O35701 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.66□□□□□ -0.06
Matn3O35701 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Matn3O35701 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Matn3O35701 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.65□□□□□ -0.06
Matn3O35701 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Matn3O35701 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms