Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa1O35683 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ndufa1O35683 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ndufa1O35683 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.55
Ndufa1O35683 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ndufa1O35683 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ndufa1O35683 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ndufa1O35683 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ndufa1O35683 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.58□□□□□ -0.56
Ndufa1O35683 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.58□□□□□ -0.56
Ndufa1O35683 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.58□□□□□ -0.56
Ndufa1O35683 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.58□□□□□ -0.56
Ndufa1O35683 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.58□□□□□ -0.56
Ndufa1O35683 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ndufa1O35683 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ndufa1O35683 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Ndufa1O35683 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.58□□□□□ -0.56
Ndufa1O35683 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.58□□□□□ -0.56
Ndufa1O35683 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ndufa1O35683 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndufa1O35683 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.57□□□□□ -0.56
Ndufa1O35683 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.57□□□□□ -0.56
Ndufa1O35683 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ndufa1O35683 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Gm12382-201ENSMUST00000122005 922 ntBASIC11.57□□□□□ -0.56
Ndufa1O35683 Gm6576-201ENSMUST00000169678 883 ntBASIC11.57□□□□□ -0.56
Ndufa1O35683 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Ndufa1O35683 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ndufa1O35683 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.57□□□□□ -0.56
Ndufa1O35683 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.57□□□□□ -0.56
Ndufa1O35683 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndufa1O35683 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.56□□□□□ -0.56
Ndufa1O35683 App-207ENSMUST00000227737 2827 ntBASIC11.56□□□□□ -0.56
Ndufa1O35683 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ndufa1O35683 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Gm20049-201ENSMUST00000219950 730 ntBASIC11.56□□□□□ -0.56
Ndufa1O35683 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Ndufa1O35683 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ndufa1O35683 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndufa1O35683 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms