Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.89□□□□□ -0.03
Capn1O35350 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Capn1O35350 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.89□□□□□ -0.03
Capn1O35350 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Capn1O35350 Gm15372-201ENSMUST00000120729 834 ntBASIC14.89□□□□□ -0.03
Capn1O35350 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.89□□□□□ -0.03
Capn1O35350 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.89□□□□□ -0.03
Capn1O35350 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.89□□□□□ -0.03
Capn1O35350 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.89□□□□□ -0.03
Capn1O35350 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Capn1O35350 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.89□□□□□ -0.03
Capn1O35350 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.88□□□□□ -0.03
Capn1O35350 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.88□□□□□ -0.03
Capn1O35350 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.88□□□□□ -0.03
Capn1O35350 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Gm44771-201ENSMUST00000206975 626 ntBASIC14.88□□□□□ -0.03
Capn1O35350 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.88□□□□□ -0.03
Capn1O35350 Mzt1-203ENSMUST00000227948 952 ntBASIC14.88□□□□□ -0.03
Capn1O35350 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Capn1O35350 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.88□□□□□ -0.03
Capn1O35350 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Capn1O35350 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.88□□□□□ -0.03
Capn1O35350 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Capn1O35350 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.87□□□□□ -0.03
Capn1O35350 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Capn1O35350 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.87□□□□□ -0.03
Capn1O35350 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.87□□□□□ -0.03
Capn1O35350 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.87□□□□□ -0.03
Capn1O35350 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Capn1O35350 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Capn1O35350 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.86□□□□□ -0.03
Capn1O35350 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Capn1O35350 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Capn1O35350 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.86□□□□□ -0.03
Capn1O35350 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Capn1O35350 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.86□□□□□ -0.03
Capn1O35350 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.86□□□□□ -0.03
Capn1O35350 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Capn1O35350 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms