Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cl1O35188 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Gm10819-201ENSMUST00000099988 561 ntBASIC15.11■□□□□ 0.01
Cx3cl1O35188 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cl1O35188 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.1■□□□□ 0.01
Cx3cl1O35188 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.1■□□□□ 0.01
Cx3cl1O35188 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cl1O35188 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.09■□□□□ 0.01
Cx3cl1O35188 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cl1O35188 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms