Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trove2O08848 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.54■□□□□ 0.24
Trove2O08848 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trove2O08848 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trove2O08848 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Gm7638-201ENSMUST00000121348 967 ntBASIC16.54■□□□□ 0.24
Trove2O08848 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.54■□□□□ 0.24
Trove2O08848 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.54■□□□□ 0.24
Trove2O08848 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.54■□□□□ 0.24
Trove2O08848 Odf3b-204ENSMUST00000227834 930 ntBASIC16.54■□□□□ 0.24
Trove2O08848 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trove2O08848 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Trove2O08848 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trove2O08848 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trove2O08848 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Trove2O08848 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.53■□□□□ 0.24
Trove2O08848 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.53■□□□□ 0.24
Trove2O08848 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Trove2O08848 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.53■□□□□ 0.24
Trove2O08848 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.53■□□□□ 0.24
Trove2O08848 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trove2O08848 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trove2O08848 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trove2O08848 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trove2O08848 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trove2O08848 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trove2O08848 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Trove2O08848 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.52■□□□□ 0.24
Trove2O08848 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.52■□□□□ 0.24
Trove2O08848 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trove2O08848 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.52■□□□□ 0.23
Trove2O08848 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trove2O08848 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trove2O08848 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.51■□□□□ 0.23
Trove2O08848 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trove2O08848 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms