Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raet1aO08602 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.27□□□□□ -0.12
Raet1aO08602 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raet1aO08602 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raet1aO08602 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raet1aO08602 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Raet1aO08602 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Raet1aO08602 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Raet1aO08602 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Raet1aO08602 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raet1aO08602 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raet1aO08602 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raet1aO08602 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Gm17808-201ENSMUST00000200859 894 ntBASIC14.27□□□□□ -0.13
Raet1aO08602 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.27□□□□□ -0.13
Raet1aO08602 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.27□□□□□ -0.13
Raet1aO08602 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.27□□□□□ -0.13
Raet1aO08602 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Raet1aO08602 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.27□□□□□ -0.13
Raet1aO08602 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Raet1aO08602 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.27□□□□□ -0.13
Raet1aO08602 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raet1aO08602 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Raet1aO08602 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 AA414768-201ENSMUST00000121924 1257 ntBASIC14.26□□□□□ -0.13
Raet1aO08602 Gm29518-201ENSMUST00000190858 372 ntBASIC14.26□□□□□ -0.13
Raet1aO08602 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Raet1aO08602 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Raet1aO08602 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Raet1aO08602 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Raet1aO08602 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.26□□□□□ -0.13
Raet1aO08602 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Raet1aO08602 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raet1aO08602 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Raet1aO08602 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.25□□□□□ -0.13
Raet1aO08602 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.25□□□□□ -0.13
Raet1aO08602 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.25□□□□□ -0.13
Raet1aO08602 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.25□□□□□ -0.13
Raet1aO08602 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Raet1aO08602 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.25□□□□□ -0.13
Raet1aO08602 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Raet1aO08602 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Raet1aO08602 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.24□□□□□ -0.13
Raet1aO08602 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.24□□□□□ -0.13
Raet1aO08602 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Raet1aO08602 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms