Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Gm12441-201ENSMUST00000121806 588 ntBASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Gm29257-201ENSMUST00000186115 639 ntBASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shisa8J3QNX5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Gm15378-201ENSMUST00000121894 207 ntBASIC14.71□□□□□ -0.05
Shisa8J3QNX5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shisa8J3QNX5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Shisa8J3QNX5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shisa8J3QNX5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shisa8J3QNX5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shisa8J3QNX5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shisa8J3QNX5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Shisa8J3QNX5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shisa8J3QNX5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.69□□□□□ -0.06
Shisa8J3QNX5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms