Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3415J3QMS8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3415J3QMS8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Gm3415J3QMS8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Gm36967-201ENSMUST00000193814 266 ntBASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Gm3415J3QMS8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm3415J3QMS8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Dancr-204ENSMUST00000132389 2347 ntBASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3415J3QMS8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3415J3QMS8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms