Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.4■□□□□ 0.54
Nkx1-1G3UXB3 Gm4899-201ENSMUST00000178708 719 ntBASIC18.4■□□□□ 0.54
Nkx1-1G3UXB3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nkx1-1G3UXB3 Gm18062-201ENSMUST00000208020 547 ntBASIC18.4■□□□□ 0.54
Nkx1-1G3UXB3 Gm18055-201ENSMUST00000208254 547 ntBASIC18.4■□□□□ 0.54
Nkx1-1G3UXB3 CT025525.1-201ENSMUST00000226325 1054 ntBASIC18.4■□□□□ 0.54
Nkx1-1G3UXB3 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.4■□□□□ 0.54
Nkx1-1G3UXB3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-1G3UXB3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx1-1G3UXB3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nkx1-1G3UXB3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nkx1-1G3UXB3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Nkx1-1G3UXB3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Gm27618-201ENSMUST00000183671 60 ntBASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Gm27301-201ENSMUST00000184012 127 ntBASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Gm10253-201ENSMUST00000194270 940 ntBASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Gm26831-201ENSMUST00000181458 1380 ntBASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.39■□□□□ 0.53
Nkx1-1G3UXB3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx1-1G3UXB3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 AC134860.5-201ENSMUST00000225071 1249 ntBASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nkx1-1G3UXB3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Gm24158-201ENSMUST00000175263 71 ntBASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Gm27646-201ENSMUST00000183989 110 ntBASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Gm28180-201ENSMUST00000189608 722 ntBASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nkx1-1G3UXB3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms