Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdh11xF6ZNL5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Mir6404-201ENSMUST00000183699 94 ntBASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Gm18669-201ENSMUST00000216049 778 ntBASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh11xF6ZNL5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh11xF6ZNL5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Pcdh11xF6ZNL5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh11xF6ZNL5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh11xF6ZNL5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh11xF6ZNL5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh11xF6ZNL5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Pcdh11xF6ZNL5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Gm27357-201ENSMUST00000183754 135 ntBASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh11xF6ZNL5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh11xF6ZNL5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh11xF6ZNL5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdh11xF6ZNL5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh11xF6ZNL5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh11xF6ZNL5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh11xF6ZNL5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdh11xF6ZNL5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh11xF6ZNL5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh11xF6ZNL5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh11xF6ZNL5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms