Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Gm13453-201ENSMUST00000118708 357 ntBASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Mir6404-201ENSMUST00000183699 94 ntBASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc188F6WEU2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ccdc188F6WEU2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ccdc188F6WEU2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Gm8344-201ENSMUST00000119813 856 ntBASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Gm12138-201ENSMUST00000122180 951 ntBASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Gm6745-201ENSMUST00000199216 526 ntBASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 Grk6-207ENSMUST00000225925 2769 ntBASIC16.2■□□□□ 0.18
Ccdc188F6WEU2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Gm14719-201ENSMUST00000121891 340 ntBASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Gm8602-201ENSMUST00000184045 607 ntBASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc188F6WEU2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Gm23984-201ENSMUST00000157139 203 ntBASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms