Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Gm27357-201ENSMUST00000183754 135 ntBASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Gm21362-201ENSMUST00000194272 928 ntBASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cpsf4lE9Q2N0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cpsf4lE9Q2N0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Ank2-226ENSMUST00000189368 339 ntBASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4lE9Q2N0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Rprl3-201ENSMUST00000157400 290 ntBASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Mir6404-201ENSMUST00000183699 94 ntBASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Gm17807-201ENSMUST00000186869 298 ntBASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms