Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.81■□□□□ 0.12
Srp54bE9PXC0 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.8■□□□□ 0.12
Srp54bE9PXC0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Srp54bE9PXC0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Mir6404-201ENSMUST00000183699 94 ntBASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Gm6089-201ENSMUST00000197666 938 ntBASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Gm5867-201ENSMUST00000063197 592 ntBASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.79■□□□□ 0.12
Srp54bE9PXC0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Gm11780-201ENSMUST00000136880 516 ntBASIC15.78■□□□□ 0.12
Srp54bE9PXC0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Srp54bE9PXC0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms