Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.36□□□□□ -0.11
Shank1D3YZU1 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.36□□□□□ -0.11
Shank1D3YZU1 Gm5186-201ENSMUST00000218781 920 ntBASIC14.36□□□□□ -0.11
Shank1D3YZU1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Shank1D3YZU1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shank1D3YZU1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.35□□□□□ -0.11
Shank1D3YZU1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.35□□□□□ -0.11
Shank1D3YZU1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.35□□□□□ -0.11
Shank1D3YZU1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Shank1D3YZU1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.34□□□□□ -0.11
Shank1D3YZU1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Shank1D3YZU1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shank1D3YZU1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Shank1D3YZU1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shank1D3YZU1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shank1D3YZU1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Shank1D3YZU1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.33□□□□□ -0.11
Shank1D3YZU1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Shank1D3YZU1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shank1D3YZU1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms