Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp42B2RQC2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp42B2RQC2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp42B2RQC2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp42B2RQC2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp42B2RQC2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp42B2RQC2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp42B2RQC2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp42B2RQC2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp42B2RQC2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Gm9103-201ENSMUST00000119371 405 ntBASIC18.81■□□□□ 0.6
Usp42B2RQC2 Gm27867-201ENSMUST00000184778 125 ntBASIC18.81■□□□□ 0.6
Usp42B2RQC2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.81■□□□□ 0.6
Usp42B2RQC2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp42B2RQC2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp42B2RQC2 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.8■□□□□ 0.6
Usp42B2RQC2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp42B2RQC2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.79■□□□□ 0.6
Usp42B2RQC2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp42B2RQC2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.78■□□□□ 0.6
Usp42B2RQC2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.78■□□□□ 0.6
Usp42B2RQC2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp42B2RQC2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp42B2RQC2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp42B2RQC2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp42B2RQC2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.77■□□□□ 0.6
Usp42B2RQC2 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.77■□□□□ 0.6
Usp42B2RQC2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp42B2RQC2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Usp42B2RQC2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Usp42B2RQC2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.77■□□□□ 0.59
Usp42B2RQC2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.77■□□□□ 0.59
Usp42B2RQC2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.76■□□□□ 0.59
Usp42B2RQC2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.76■□□□□ 0.59
Usp42B2RQC2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp42B2RQC2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms