Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.7■□□□□ 0.1
Chd3B1AR17 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd3B1AR17 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.7■□□□□ 0.1
Chd3B1AR17 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.7■□□□□ 0.1
Chd3B1AR17 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.7■□□□□ 0.1
Chd3B1AR17 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.7■□□□□ 0.1
Chd3B1AR17 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.7■□□□□ 0.1
Chd3B1AR17 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.7■□□□□ 0.1
Chd3B1AR17 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd3B1AR17 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd3B1AR17 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Chd3B1AR17 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd3B1AR17 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.7■□□□□ 0.1
Chd3B1AR17 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd3B1AR17 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.7■□□□□ 0.1
Chd3B1AR17 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chd3B1AR17 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd3B1AR17 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd3B1AR17 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Gm11780-201ENSMUST00000136880 516 ntBASIC15.69■□□□□ 0.1
Chd3B1AR17 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Gm27628-201ENSMUST00000184911 107 ntBASIC15.69■□□□□ 0.1
Chd3B1AR17 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chd3B1AR17 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.69■□□□□ 0.1
Chd3B1AR17 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.69■□□□□ 0.1
Chd3B1AR17 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd3B1AR17 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.68■□□□□ 0.1
Chd3B1AR17 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.68■□□□□ 0.1
Chd3B1AR17 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Gm15173-201ENSMUST00000122049 433 ntBASIC15.68■□□□□ 0.1
Chd3B1AR17 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.68■□□□□ 0.1
Chd3B1AR17 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.68■□□□□ 0.1
Chd3B1AR17 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.68■□□□□ 0.1
Chd3B1AR17 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Chd3B1AR17 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd3B1AR17 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.67■□□□□ 0.1
Chd3B1AR17 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm8825-201ENSMUST00000182565 998 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm4518-201ENSMUST00000182638 718 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms