Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Ubr4A2AN08 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Gm42853-201ENSMUST00000201273 1387 ntBASIC8.43□□□□□ -1.06
Ubr4A2AN08 Gm37374-201ENSMUST00000194954 1829 ntBASIC8.43□□□□□ -1.06
Ubr4A2AN08 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Fcho2-208ENSMUST00000224992 2964 ntBASIC8.43□□□□□ -1.06
Ubr4A2AN08 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC8.43□□□□□ -1.06
Ubr4A2AN08 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC8.43□□□□□ -1.06
Ubr4A2AN08 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Gm27892-201ENSMUST00000185017 106 ntBASIC8.43□□□□□ -1.06
Ubr4A2AN08 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Gm8344-201ENSMUST00000119813 856 ntBASIC8.43□□□□□ -1.06
Ubr4A2AN08 Gm27243-201ENSMUST00000183964 521 ntBASIC8.43□□□□□ -1.06
Ubr4A2AN08 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Gm3283-201ENSMUST00000199319 1350 ntBASIC8.43□□□□□ -1.06
Ubr4A2AN08 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Ubr4A2AN08 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Gm10327-201ENSMUST00000105222 1002 ntBASIC8.42□□□□□ -1.06
Ubr4A2AN08 Gm9172-201ENSMUST00000212092 954 ntBASIC8.42□□□□□ -1.06
Ubr4A2AN08 Gm8399-201ENSMUST00000082300 1117 ntBASIC8.42□□□□□ -1.06
Ubr4A2AN08 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Gm14767-201ENSMUST00000121559 586 ntBASIC8.42□□□□□ -1.06
Ubr4A2AN08 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Gm22189-201ENSMUST00000103822 86 ntBASIC8.42□□□□□ -1.06
Ubr4A2AN08 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Gm9385-201ENSMUST00000117563 472 ntBASIC8.42□□□□□ -1.06
Ubr4A2AN08 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC8.42□□□□□ -1.06
Ubr4A2AN08 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Ubr4A2AN08 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC8.41□□□□□ -1.06
Ubr4A2AN08 AC166341.4-201ENSMUST00000220625 123 ntBASIC8.41□□□□□ -1.06
Ubr4A2AN08 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Gm16198-201ENSMUST00000118766 670 ntBASIC8.41□□□□□ -1.06
Ubr4A2AN08 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ubr4A2AN08 Gm34220-201ENSMUST00000223001 2709 ntBASIC8.41□□□□□ -1.06
Ubr4A2AN08 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms