Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Trav9d-4A0A0G2JG37 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav9d-4A0A0G2JG37 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm12382-201ENSMUST00000122005 922 ntBASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms