Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm11355-201ENSMUST00000121120 306 ntBASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm18032-201ENSMUST00000222541 538 ntBASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm10013-201ENSMUST00000106074 672 ntBASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm10231-201ENSMUST00000181584 441 ntBASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm10175-202ENSMUST00000208752 441 ntBASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav9n-2A0A0G2JDP3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms