Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-4A0A0B4J1K2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9-4A0A0B4J1K2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9-4A0A0B4J1K2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm15794-201ENSMUST00000120182 631 ntBASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm27742-201ENSMUST00000184667 60 ntBASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trav9-4A0A0B4J1K2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms