Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv19A0A0B4J1H4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm15565-201ENSMUST00000118890 427 ntBASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv19A0A0B4J1H4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms