Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trbv5A0A0B4J1G9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm10584-201ENSMUST00000207036 2628 ntBASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm17661-201ENSMUST00000170317 270 ntBASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Rab3c-203ENSMUST00000224180 967 ntBASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trbv5A0A0B4J1G9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm26524-201ENSMUST00000192339 390 ntBASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv5A0A0B4J1G9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv5A0A0B4J1G9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm42569-201ENSMUST00000200539 472 ntBASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms