Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.27■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.27■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sirpb1aA0A0A6YYP6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.27■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Mir1199-201ENSMUST00000117015 119 ntBASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 App-207ENSMUST00000227737 2827 ntBASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms