Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ighv1-56A0A0A6YXG2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Gm44450-201ENSMUST00000199528 114 ntBASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ighv1-56A0A0A6YXG2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms