Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbc1A0A0A6YWV4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbc1A0A0A6YWV4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm27357-201ENSMUST00000183754 135 ntBASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Gm44430-201ENSMUST00000203376 995 ntBASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.78□□□□□ -0.04
Trbc1A0A0A6YWV4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbc1A0A0A6YWV4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trbc1A0A0A6YWV4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbc1A0A0A6YWV4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trbc1A0A0A6YWV4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trbc1A0A0A6YWV4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbc1A0A0A6YWV4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbc1A0A0A6YWV4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbc1A0A0A6YWV4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbc1A0A0A6YWV4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Gm17807-201ENSMUST00000186869 298 ntBASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Ank2-226ENSMUST00000189368 339 ntBASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbc1A0A0A6YWV4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trbc1A0A0A6YWV4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms