Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm7791-201ENSMUST00000219066 539 ntBASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm18115-201ENSMUST00000221209 621 ntBASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms