Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm43799-201ENSMUST00000201845 579 ntBASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav21-dv12A0A075B6C4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav21-dv12A0A075B6C4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trav21-dv12A0A075B6C4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Dancr-204ENSMUST00000132389 2347 ntBASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm26039-201ENSMUST00000158152 144 ntBASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm45058-201ENSMUST00000205810 766 ntBASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav21-dv12A0A075B6C4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm15565-201ENSMUST00000118890 427 ntBASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mir1668-201ENSMUST00000184114 107 ntBASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mir6982-201ENSMUST00000184354 68 ntBASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav21-dv12A0A075B6C4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms