Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm25016-201ENSMUST00000158399 131 ntBASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm17661-201ENSMUST00000170317 270 ntBASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm21362-201ENSMUST00000194272 928 ntBASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-7A0A075B6B0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-7A0A075B6B0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-7A0A075B6B0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-7A0A075B6B0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-7A0A075B6B0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-7A0A075B6B0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-7A0A075B6B0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-7A0A075B6B0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-7A0A075B6B0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Gm18958-201ENSMUST00000174258 762 ntBASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-7A0A075B6B0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms